Cluster: HRGMv2_4407_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4407
- CGC Family ID: CGCFAM_06582
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4407_53 | HRGMv2_4407_53_13 | 11784 | 12884 | + | GT28 |
| TF | HRGMv2_4407_53 | HRGMv2_4407_53_14 | 12953 | 13849 | - | HTH_1 |
| TC | HRGMv2_4407_53 | HRGMv2_4407_53_15 | 14018 | 15460 | + | 2.A.25.1.5 |
Gene ID: HRGMv2_4407_53_13
Type: CAZyme
Location: 11784 - 12884 (+)
Type: CAZyme
Location: 11784 - 12884 (+)
Gene ID: HRGMv2_4407_53_14
Type: TF
Location: 12953 - 13849 (-)
Type: TF
Location: 12953 - 13849 (-)
Gene ID: HRGMv2_4407_53_15
Type: TC
Location: 14018 - 15460 (+)
Type: TC
Location: 14018 - 15460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
JAJPXI01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.