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Cluster: HRGMv2_4407_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4407_3 HRGMv2_4407_3_27 29415 30188 - GT32
CAZyme HRGMv2_4407_3 HRGMv2_4407_3_28 30206 31087 - GT2
pfam HRGMv2_4407_3 HRGMv2_4407_3_29 31095 31904 - Glycos_transf_2
TC HRGMv2_4407_3 HRGMv2_4407_3_30 31904 32959 - 9.B.97.1.2
CAZyme HRGMv2_4407_3 HRGMv2_4407_3_31 32974 33999 - GT2
CAZyme HRGMv2_4407_3 HRGMv2_4407_3_32 34002 34757 - GT101
NULL(UNKNOWN) HRGMv2_4407_3 HRGMv2_4407_3_33 34747 35916 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4407_3 HRGMv2_4407_3_34 35917 37122 - GT4
pfam HRGMv2_4407_3 HRGMv2_4407_3_35 37163 37825 - PglD_N
TC HRGMv2_4407_3 HRGMv2_4407_3_36 37782 38447 - 9.B.18.1.2
Gene ID: HRGMv2_4407_3_27
Type: CAZyme
Location: 29415 - 30188 (-)
Gene ID: HRGMv2_4407_3_28
Type: CAZyme
Location: 30206 - 31087 (-)
Gene ID: HRGMv2_4407_3_29
Type: pfam
Location: 31095 - 31904 (-)
Gene ID: HRGMv2_4407_3_30
Type: TC
Location: 31904 - 32959 (-)
Gene ID: HRGMv2_4407_3_31
Type: CAZyme
Location: 32974 - 33999 (-)
Gene ID: HRGMv2_4407_3_32
Type: CAZyme
Location: 34002 - 34757 (-)
Gene ID: HRGMv2_4407_3_33
Type:
Location: 34747 - 35916 (-)
Gene ID: HRGMv2_4407_3_34
Type: CAZyme
Location: 35917 - 37122 (-)
Gene ID: HRGMv2_4407_3_35
Type: pfam
Location: 37163 - 37825 (-)
Gene ID: HRGMv2_4407_3_36
Type: TC
Location: 37782 - 38447 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
JAJPXI01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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