Cluster: HRGMv2_4406_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4406
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4406_25 | HRGMv2_4406_25_9 | 17128 | 18255 | - | GT28 |
| TC | HRGMv2_4406_25 | HRGMv2_4406_25_10 | 18268 | 19467 | - | 2.A.103.1.3 |
| TC | HRGMv2_4406_25 | HRGMv2_4406_25_11 | 19660 | 20643 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_4406_25_9
Type: CAZyme
Location: 17128 - 18255 (-)
Type: CAZyme
Location: 17128 - 18255 (-)
Gene ID: HRGMv2_4406_25_10
Type: TC
Location: 18268 - 19467 (-)
Type: TC
Location: 18268 - 19467 (-)
Gene ID: HRGMv2_4406_25_11
Type: TC
Location: 19660 - 20643 (-)
Type: TC
Location: 19660 - 20643 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Avoscillospira
Species
Avoscillospira stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.