Cluster: HRGMv2_4406_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4406
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4406_24 | HRGMv2_4406_24_1 | 61 | 1773 | - | CBM34 | GH13_20 |
| TC | HRGMv2_4406_24 | HRGMv2_4406_24_2 | 1770 | 2612 | - | 3.A.1.1.6 |
| TC | HRGMv2_4406_24 | HRGMv2_4406_24_3 | 2609 | 3502 | - | 3.A.1.1.2 |
| TC | HRGMv2_4406_24 | HRGMv2_4406_24_4 | 3507 | 4706 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_4406_24_1
Type: CAZyme
Location: 61 - 1773 (-)
Type: CAZyme
Location: 61 - 1773 (-)
Gene ID: HRGMv2_4406_24_2
Type: TC
Location: 1770 - 2612 (-)
Type: TC
Location: 1770 - 2612 (-)
Gene ID: HRGMv2_4406_24_3
Type: TC
Location: 2609 - 3502 (-)
Type: TC
Location: 2609 - 3502 (-)
Gene ID: HRGMv2_4406_24_4
Type: TC
Location: 3507 - 4706 (-)
Type: TC
Location: 3507 - 4706 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Avoscillospira
Species
Avoscillospira stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.