Cluster: HRGMv2_4406_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4406
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4406_8 | HRGMv2_4406_8_52 | 52440 | 53798 | + | 3.A.1.1.27 |
| TC | HRGMv2_4406_8 | HRGMv2_4406_8_53 | 53795 | 54646 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_4406_8 | HRGMv2_4406_8_54 | 54651 | 56360 | + | CBM34 | GH13_20 |
Gene ID: HRGMv2_4406_8_52
Type: TC
Location: 52440 - 53798 (+)
Type: TC
Location: 52440 - 53798 (+)
Gene ID: HRGMv2_4406_8_53
Type: TC
Location: 53795 - 54646 (+)
Type: TC
Location: 53795 - 54646 (+)
Gene ID: HRGMv2_4406_8_54
Type: CAZyme
Location: 54651 - 56360 (+)
Type: CAZyme
Location: 54651 - 56360 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Avoscillospira
Species
Avoscillospira stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.