Cluster: HRGMv2_4404_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4404
- CGC Family ID: CGCFAM_00385
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4404_11 | HRGMv2_4404_11_23 | 21043 | 22191 | + | 3.A.1.1.22 |
| TF | HRGMv2_4404_11 | HRGMv2_4404_11_24 | 22389 | 23414 | + | 0043758 |
| pfam | HRGMv2_4404_11 | HRGMv2_4404_11_25 | 23422 | 23931 | + | GrpE |
| TC | HRGMv2_4404_11 | HRGMv2_4404_11_26 | 23994 | 25829 | + | 1.A.33.1.4 |
| sulfatase | HRGMv2_4404_11 | HRGMv2_4404_11_27 | 25914 | 27065 | + | S1_7 |
| CAZyme | HRGMv2_4404_11 | HRGMv2_4404_11_28 | 27173 | 28891 | + | GH36 |
Gene ID: HRGMv2_4404_11_23
Type: TC
Location: 21043 - 22191 (+)
Type: TC
Location: 21043 - 22191 (+)
Gene ID: HRGMv2_4404_11_24
Type: TF
Location: 22389 - 23414 (+)
Type: TF
Location: 22389 - 23414 (+)
Gene ID: HRGMv2_4404_11_25
Type: pfam
Location: 23422 - 23931 (+)
Type: pfam
Location: 23422 - 23931 (+)
Gene ID: HRGMv2_4404_11_26
Type: TC
Location: 23994 - 25829 (+)
Type: TC
Location: 23994 - 25829 (+)
Gene ID: HRGMv2_4404_11_27
Type: sulfatase
Location: 25914 - 27065 (+)
Type: sulfatase
Location: 25914 - 27065 (+)
Gene ID: HRGMv2_4404_11_28
Type: CAZyme
Location: 27173 - 28891 (+)
Type: CAZyme
Location: 27173 - 28891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.