Cluster: HRGMv2_4404_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4404
- CGC Family ID: CGCFAM_02617
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4404_9 | HRGMv2_4404_9_2 | 173 | 2317 | - | 9.A.8.1.5 |
| STP | HRGMv2_4404_9 | HRGMv2_4404_9_3 | 2330 | 2569 | - | FeoA |
| pfam | HRGMv2_4404_9 | HRGMv2_4404_9_4 | 2766 | 3746 | + | ABC_sub_bind |
| TC | HRGMv2_4404_9 | HRGMv2_4404_9_5 | 3824 | 4744 | + | 3.A.1.34.1 |
| TC | HRGMv2_4404_9 | HRGMv2_4404_9_6 | 4737 | 5531 | + | 3.A.1.34.1 |
| CAZyme | HRGMv2_4404_9 | HRGMv2_4404_9_7 | 5611 | 6693 | + | CE9 |
Gene ID: HRGMv2_4404_9_2
Type: TC
Location: 173 - 2317 (-)
Type: TC
Location: 173 - 2317 (-)
Gene ID: HRGMv2_4404_9_3
Type: STP
Location: 2330 - 2569 (-)
Type: STP
Location: 2330 - 2569 (-)
Gene ID: HRGMv2_4404_9_4
Type: pfam
Location: 2766 - 3746 (+)
Type: pfam
Location: 2766 - 3746 (+)
Gene ID: HRGMv2_4404_9_5
Type: TC
Location: 3824 - 4744 (+)
Type: TC
Location: 3824 - 4744 (+)
Gene ID: HRGMv2_4404_9_6
Type: TC
Location: 4737 - 5531 (+)
Type: TC
Location: 4737 - 5531 (+)
Gene ID: HRGMv2_4404_9_7
Type: CAZyme
Location: 5611 - 6693 (+)
Type: CAZyme
Location: 5611 - 6693 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.