Cluster: HRGMv2_4404_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4404
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4404_4 | HRGMv2_4404_4_15 | 16098 | 17312 | + | 3.B.1.1.3 |
| TC | HRGMv2_4404_4 | HRGMv2_4404_4_16 | 17727 | 19166 | - | 2.A.40.1.2 |
| NULL(UNKNOWN) | HRGMv2_4404_4 | HRGMv2_4404_4_17 | 19448 | 19672 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4404_4 | HRGMv2_4404_4_18 | 19823 | 20533 | - | 9.B.97.6.2 |
| NULL(UNKNOWN) | HRGMv2_4404_4 | HRGMv2_4404_4_19 | 20796 | 21752 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4404_4 | HRGMv2_4404_4_20 | 22184 | 24076 | + | GH2 |
Gene ID: HRGMv2_4404_4_15
Type: TC
Location: 16098 - 17312 (+)
Type: TC
Location: 16098 - 17312 (+)
Gene ID: HRGMv2_4404_4_16
Type: TC
Location: 17727 - 19166 (-)
Type: TC
Location: 17727 - 19166 (-)
Gene ID: HRGMv2_4404_4_17
Type:
Location: 19448 - 19672 (-)
Type:
Location: 19448 - 19672 (-)
Gene ID: HRGMv2_4404_4_18
Type: TC
Location: 19823 - 20533 (-)
Type: TC
Location: 19823 - 20533 (-)
Gene ID: HRGMv2_4404_4_19
Type:
Location: 20796 - 21752 (-)
Type:
Location: 20796 - 21752 (-)
Gene ID: HRGMv2_4404_4_20
Type: CAZyme
Location: 22184 - 24076 (+)
Type: CAZyme
Location: 22184 - 24076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.