Cluster: HRGMv2_4404_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4404
- CGC Family ID: CGCFAM_00248
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4404_2 | HRGMv2_4404_2_36 | 32669 | 35143 | - | GH97 |
| pfam | HRGMv2_4404_2 | HRGMv2_4404_2_37 | 35416 | 35793 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | HRGMv2_4404_2 | HRGMv2_4404_2_38 | 35861 | 36379 | - | Ribosomal_L10 |
| TC | HRGMv2_4404_2 | HRGMv2_4404_2_39 | 36683 | 37378 | - | 1.C.82.1.1 |
Gene ID: HRGMv2_4404_2_36
Type: CAZyme
Location: 32669 - 35143 (-)
Type: CAZyme
Location: 32669 - 35143 (-)
Gene ID: HRGMv2_4404_2_37
Type: pfam
Location: 35416 - 35793 (-)
Type: pfam
Location: 35416 - 35793 (-)
Gene ID: HRGMv2_4404_2_38
Type: pfam
Location: 35861 - 36379 (-)
Type: pfam
Location: 35861 - 36379 (-)
Gene ID: HRGMv2_4404_2_39
Type: TC
Location: 36683 - 37378 (-)
Type: TC
Location: 36683 - 37378 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.