Cluster: HRGMv2_4404_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4404
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4404_60 | HRGMv2_4404_60_3 | 1503 | 2294 | - | 8.A.3.2.3 |
| TC | HRGMv2_4404_60 | HRGMv2_4404_60_4 | 2254 | 3060 | - | 8.A.3.2.4 |
| pfam | HRGMv2_4404_60 | HRGMv2_4404_60_5 | 3235 | 4011 | - | Metallophos | YmdB |
| pfam | HRGMv2_4404_60 | HRGMv2_4404_60_6 | 4011 | 4859 | - | DegV |
| CAZyme | HRGMv2_4404_60 | HRGMv2_4404_60_7 | 5250 | 7655 | + | GT35 |
| CAZyme | HRGMv2_4404_60 | HRGMv2_4404_60_8 | 7656 | 9497 | + | GH13_39 |
Gene ID: HRGMv2_4404_60_3
Type: TC
Location: 1503 - 2294 (-)
Type: TC
Location: 1503 - 2294 (-)
Gene ID: HRGMv2_4404_60_4
Type: TC
Location: 2254 - 3060 (-)
Type: TC
Location: 2254 - 3060 (-)
Gene ID: HRGMv2_4404_60_5
Type: pfam
Location: 3235 - 4011 (-)
Type: pfam
Location: 3235 - 4011 (-)
Gene ID: HRGMv2_4404_60_6
Type: pfam
Location: 4011 - 4859 (-)
Type: pfam
Location: 4011 - 4859 (-)
Gene ID: HRGMv2_4404_60_7
Type: CAZyme
Location: 5250 - 7655 (+)
Type: CAZyme
Location: 5250 - 7655 (+)
Gene ID: HRGMv2_4404_60_8
Type: CAZyme
Location: 7656 - 9497 (+)
Type: CAZyme
Location: 7656 - 9497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.