Cluster: HRGMv2_4404_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4404
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4404_20 | HRGMv2_4404_20_8 | 7221 | 8210 | - | 8.A.5.1.3 |
| CAZyme | HRGMv2_4404_20 | HRGMv2_4404_20_9 | 8226 | 9824 | - | GH13_31 |
| pfam | HRGMv2_4404_20 | HRGMv2_4404_20_10 | 9940 | 10338 | - | DUF4234 |
| TC | HRGMv2_4404_20 | HRGMv2_4404_20_11 | 10432 | 11019 | - | 2.A.107.1.2 |
| TC | HRGMv2_4404_20 | HRGMv2_4404_20_12 | 11330 | 12748 | + | 2.A.22.5.3 |
| pfam | HRGMv2_4404_20 | HRGMv2_4404_20_13 | 12805 | 13578 | - | Hydrolase | Hydrolase_like | Hydrolase_6 | HAD_2 |
| TC | HRGMv2_4404_20 | HRGMv2_4404_20_14 | 13772 | 16714 | - | 3.A.1.122.14 |
Gene ID: HRGMv2_4404_20_8
Type: TC
Location: 7221 - 8210 (-)
Type: TC
Location: 7221 - 8210 (-)
Gene ID: HRGMv2_4404_20_9
Type: CAZyme
Location: 8226 - 9824 (-)
Type: CAZyme
Location: 8226 - 9824 (-)
Gene ID: HRGMv2_4404_20_10
Type: pfam
Location: 9940 - 10338 (-)
Type: pfam
Location: 9940 - 10338 (-)
Gene ID: HRGMv2_4404_20_11
Type: TC
Location: 10432 - 11019 (-)
Type: TC
Location: 10432 - 11019 (-)
Gene ID: HRGMv2_4404_20_12
Type: TC
Location: 11330 - 12748 (+)
Type: TC
Location: 11330 - 12748 (+)
Gene ID: HRGMv2_4404_20_13
Type: pfam
Location: 12805 - 13578 (-)
Type: pfam
Location: 12805 - 13578 (-)
Gene ID: HRGMv2_4404_20_14
Type: TC
Location: 13772 - 16714 (-)
Type: TC
Location: 13772 - 16714 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.