Cluster: HRGMv2_4404_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4404
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4404_16 | HRGMv2_4404_16_6 | 5158 | 6258 | + | 3.A.1.132.1 |
| TC | HRGMv2_4404_16 | HRGMv2_4404_16_7 | 6261 | 8894 | + | 3.A.1.132.3 |
| NULL(UNKNOWN) | HRGMv2_4404_16 | HRGMv2_4404_16_8 | 8894 | 10636 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4404_16 | HRGMv2_4404_16_9 | 10831 | 13473 | + | 3.A.3.2.21 |
| TC | HRGMv2_4404_16 | HRGMv2_4404_16_10 | 13498 | 14088 | + | 3.D.1.8.1 |
| TC | HRGMv2_4404_16 | HRGMv2_4404_16_11 | 14101 | 15027 | + | 3.D.1.8.1 |
| CAZyme | HRGMv2_4404_16 | HRGMv2_4404_16_12 | 15113 | 16189 | + | GH179 |
Gene ID: HRGMv2_4404_16_6
Type: TC
Location: 5158 - 6258 (+)
Type: TC
Location: 5158 - 6258 (+)
Gene ID: HRGMv2_4404_16_7
Type: TC
Location: 6261 - 8894 (+)
Type: TC
Location: 6261 - 8894 (+)
Gene ID: HRGMv2_4404_16_8
Type:
Location: 8894 - 10636 (+)
Type:
Location: 8894 - 10636 (+)
Gene ID: HRGMv2_4404_16_9
Type: TC
Location: 10831 - 13473 (+)
Type: TC
Location: 10831 - 13473 (+)
Gene ID: HRGMv2_4404_16_10
Type: TC
Location: 13498 - 14088 (+)
Type: TC
Location: 13498 - 14088 (+)
Gene ID: HRGMv2_4404_16_11
Type: TC
Location: 14101 - 15027 (+)
Type: TC
Location: 14101 - 15027 (+)
Gene ID: HRGMv2_4404_16_12
Type: CAZyme
Location: 15113 - 16189 (+)
Type: CAZyme
Location: 15113 - 16189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.