Cluster: HRGMv2_4404_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4404
- CGC Family ID: CGCFAM_00088
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4404_15 | HRGMv2_4404_15_11 | 10456 | 11787 | + | 3.A.1.1.45 |
| TC | HRGMv2_4404_15 | HRGMv2_4404_15_12 | 11843 | 12754 | + | 3.A.1.1.45 |
| TC | HRGMv2_4404_15 | HRGMv2_4404_15_13 | 12754 | 13620 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_4404_15 | HRGMv2_4404_15_14 | 13639 | 15135 | + | GH77 |
| NULL(UNKNOWN) | HRGMv2_4404_15 | HRGMv2_4404_15_15 | 15297 | 15737 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4404_15 | HRGMv2_4404_15_16 | 15767 | 16261 | - | VanZ |
| CAZyme | HRGMv2_4404_15 | HRGMv2_4404_15_17 | 16382 | 19048 | - | GT51 |
Gene ID: HRGMv2_4404_15_11
Type: TC
Location: 10456 - 11787 (+)
Type: TC
Location: 10456 - 11787 (+)
Gene ID: HRGMv2_4404_15_12
Type: TC
Location: 11843 - 12754 (+)
Type: TC
Location: 11843 - 12754 (+)
Gene ID: HRGMv2_4404_15_13
Type: TC
Location: 12754 - 13620 (+)
Type: TC
Location: 12754 - 13620 (+)
Gene ID: HRGMv2_4404_15_14
Type: CAZyme
Location: 13639 - 15135 (+)
Type: CAZyme
Location: 13639 - 15135 (+)
Gene ID: HRGMv2_4404_15_15
Type:
Location: 15297 - 15737 (+)
Type:
Location: 15297 - 15737 (+)
Gene ID: HRGMv2_4404_15_16
Type: pfam
Location: 15767 - 16261 (-)
Type: pfam
Location: 15767 - 16261 (-)
Gene ID: HRGMv2_4404_15_17
Type: CAZyme
Location: 16382 - 19048 (-)
Type: CAZyme
Location: 16382 - 19048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.