Cluster: HRGMv2_4404_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4404
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4404_13 | HRGMv2_4404_13_6 | 4701 | 5990 | + | GT4 |
| pfam | HRGMv2_4404_13 | HRGMv2_4404_13_7 | 6074 | 8350 | - | Dockerin_1 |
| pfam | HRGMv2_4404_13 | HRGMv2_4404_13_8 | 8497 | 10143 | - | Dockerin_1 | Big_3 |
| TC | HRGMv2_4404_13 | HRGMv2_4404_13_9 | 10337 | 11833 | + | 3.A.1.5.11 |
Gene ID: HRGMv2_4404_13_6
Type: CAZyme
Location: 4701 - 5990 (+)
Type: CAZyme
Location: 4701 - 5990 (+)
Gene ID: HRGMv2_4404_13_7
Type: pfam
Location: 6074 - 8350 (-)
Type: pfam
Location: 6074 - 8350 (-)
Gene ID: HRGMv2_4404_13_8
Type: pfam
Location: 8497 - 10143 (-)
Type: pfam
Location: 8497 - 10143 (-)
Gene ID: HRGMv2_4404_13_9
Type: TC
Location: 10337 - 11833 (+)
Type: TC
Location: 10337 - 11833 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.