Cluster: HRGMv2_4403_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4403
- CGC Family ID: CGCFAM_05112
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4403_3 | HRGMv2_4403_3_68 | 63061 | 63969 | - | 3.A.1.131.1 |
| pfam | HRGMv2_4403_3 | HRGMv2_4403_3_69 | 64064 | 65455 | - | Transpeptidase |
| TC | HRGMv2_4403_3 | HRGMv2_4403_3_70 | 65492 | 67138 | - | 2.A.103.1.3 |
| TC | HRGMv2_4403_3 | HRGMv2_4403_3_71 | 67178 | 68785 | - | 2.A.66.1.40 |
| pfam | HRGMv2_4403_3 | HRGMv2_4403_3_72 | 68811 | 70220 | - | Wzy_C |
| CAZyme | HRGMv2_4403_3 | HRGMv2_4403_3_73 | 70260 | 71357 | - | GT4 |
| CAZyme | HRGMv2_4403_3 | HRGMv2_4403_3_74 | 71382 | 72368 | - | GT2 |
Gene ID: HRGMv2_4403_3_68
Type: TC
Location: 63061 - 63969 (-)
Type: TC
Location: 63061 - 63969 (-)
Gene ID: HRGMv2_4403_3_69
Type: pfam
Location: 64064 - 65455 (-)
Type: pfam
Location: 64064 - 65455 (-)
Gene ID: HRGMv2_4403_3_70
Type: TC
Location: 65492 - 67138 (-)
Type: TC
Location: 65492 - 67138 (-)
Gene ID: HRGMv2_4403_3_71
Type: TC
Location: 67178 - 68785 (-)
Type: TC
Location: 67178 - 68785 (-)
Gene ID: HRGMv2_4403_3_72
Type: pfam
Location: 68811 - 70220 (-)
Type: pfam
Location: 68811 - 70220 (-)
Gene ID: HRGMv2_4403_3_73
Type: CAZyme
Location: 70260 - 71357 (-)
Type: CAZyme
Location: 70260 - 71357 (-)
Gene ID: HRGMv2_4403_3_74
Type: CAZyme
Location: 71382 - 72368 (-)
Type: CAZyme
Location: 71382 - 72368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1491
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.