Cluster: HRGMv2_4401_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4401
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4401_75 | HRGMv2_4401_75_4 | 3930 | 5159 | - | 9.A.28.1.1 |
| STP | HRGMv2_4401_75 | HRGMv2_4401_75_5 | 5534 | 6100 | + | TetR_N |
| CAZyme | HRGMv2_4401_75 | HRGMv2_4401_75_6 | 6746 | 8557 | - | CE1 |
| TC | HRGMv2_4401_75 | HRGMv2_4401_75_7 | 8572 | 9570 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_4401_75_4
Type: TC
Location: 3930 - 5159 (-)
Type: TC
Location: 3930 - 5159 (-)
Gene ID: HRGMv2_4401_75_5
Type: STP
Location: 5534 - 6100 (+)
Type: STP
Location: 5534 - 6100 (+)
Gene ID: HRGMv2_4401_75_6
Type: CAZyme
Location: 6746 - 8557 (-)
Type: CAZyme
Location: 6746 - 8557 (-)
Gene ID: HRGMv2_4401_75_7
Type: TC
Location: 8572 - 9570 (-)
Type: TC
Location: 8572 - 9570 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum pullistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.