Cluster: HRGMv2_4401_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4401
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4401_6 | HRGMv2_4401_6_1 | 175 | 1350 | - | GH179 |
| TF | HRGMv2_4401_6 | HRGMv2_4401_6_2 | 1575 | 2276 | + | Trans_reg_C |
| TC | HRGMv2_4401_6 | HRGMv2_4401_6_3 | 2263 | 3861 | + | 2.A.21.9.1 |
| NULL(UNKNOWN) | HRGMv2_4401_6 | HRGMv2_4401_6_4 | 4016 | 4396 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4401_6 | HRGMv2_4401_6_5 | 4526 | 6043 | + | 2.A.1.42.2 |
Gene ID: HRGMv2_4401_6_1
Type: CAZyme
Location: 175 - 1350 (-)
Type: CAZyme
Location: 175 - 1350 (-)
Gene ID: HRGMv2_4401_6_2
Type: TF
Location: 1575 - 2276 (+)
Type: TF
Location: 1575 - 2276 (+)
Gene ID: HRGMv2_4401_6_3
Type: TC
Location: 2263 - 3861 (+)
Type: TC
Location: 2263 - 3861 (+)
Gene ID: HRGMv2_4401_6_4
Type:
Location: 4016 - 4396 (+)
Type:
Location: 4016 - 4396 (+)
Gene ID: HRGMv2_4401_6_5
Type: TC
Location: 4526 - 6043 (+)
Type: TC
Location: 4526 - 6043 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum pullistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.