Cluster: HRGMv2_4401_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: HRGMv2_4401
- CGC Family ID: CGCFAM_00066
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4401_195 | HRGMv2_4401_195_2 | 1125 | 1439 | - | 4.A.3.2.8 |
| TC | HRGMv2_4401_195 | HRGMv2_4401_195_3 | 1461 | 2774 | - | 4.A.3.2.8 |
| TC | HRGMv2_4401_195 | HRGMv2_4401_195_4 | 2949 | 3257 | - | 4.A.3.2.9 |
| CAZyme | HRGMv2_4401_195 | HRGMv2_4401_195_5 | 3274 | 4710 | - | GH1 |
Gene ID: HRGMv2_4401_195_2
Type: TC
Location: 1125 - 1439 (-)
Type: TC
Location: 1125 - 1439 (-)
Gene ID: HRGMv2_4401_195_3
Type: TC
Location: 1461 - 2774 (-)
Type: TC
Location: 1461 - 2774 (-)
Gene ID: HRGMv2_4401_195_4
Type: TC
Location: 2949 - 3257 (-)
Type: TC
Location: 2949 - 3257 (-)
Gene ID: HRGMv2_4401_195_5
Type: CAZyme
Location: 3274 - 4710 (-)
Type: CAZyme
Location: 3274 - 4710 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum pullistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.