Cluster: HRGMv2_4401_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4401
- CGC Family ID: CGCFAM_04038
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4401_114 | HRGMv2_4401_114_1 | 1 | 468 | - | 3.A.1.6.2 |
| CAZyme | HRGMv2_4401_114 | HRGMv2_4401_114_2 | 754 | 1947 | + | CE4 |
| pfam | HRGMv2_4401_114 | HRGMv2_4401_114_3 | 2159 | 4087 | + | Metallophos | Pur_ac_phosph_N |
| TC | HRGMv2_4401_114 | HRGMv2_4401_114_4 | 4188 | 5345 | + | 9.B.141.1.1 |
| TC | HRGMv2_4401_114 | HRGMv2_4401_114_5 | 5391 | 6230 | - | 8.A.5.1.4 |
Gene ID: HRGMv2_4401_114_1
Type: TC
Location: 1 - 468 (-)
Type: TC
Location: 1 - 468 (-)
Gene ID: HRGMv2_4401_114_2
Type: CAZyme
Location: 754 - 1947 (+)
Type: CAZyme
Location: 754 - 1947 (+)
Gene ID: HRGMv2_4401_114_3
Type: pfam
Location: 2159 - 4087 (+)
Type: pfam
Location: 2159 - 4087 (+)
Gene ID: HRGMv2_4401_114_4
Type: TC
Location: 4188 - 5345 (+)
Type: TC
Location: 4188 - 5345 (+)
Gene ID: HRGMv2_4401_114_5
Type: TC
Location: 5391 - 6230 (-)
Type: TC
Location: 5391 - 6230 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum pullistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.