Cluster: HRGMv2_4399_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4399
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4399_73 | HRGMv2_4399_73_2 | 1375 | 3078 | + | 2.A.81.1.2 |
| CAZyme | HRGMv2_4399_73 | HRGMv2_4399_73_3 | 3505 | 5580 | + | GH50 |
| TC | HRGMv2_4399_73 | HRGMv2_4399_73_4 | 6277 | 7764 | - | 2.A.3.2.7 |
| pfam | HRGMv2_4399_73 | HRGMv2_4399_73_5 | 7781 | 8362 | - | PvlArgDC |
| NULL(UNKNOWN) | HRGMv2_4399_73 | HRGMv2_4399_73_6 | 8436 | 8924 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4399_73 | HRGMv2_4399_73_7 | 9208 | 9906 | - | 2.A.6.2.16 |
Gene ID: HRGMv2_4399_73_2
Type: TC
Location: 1375 - 3078 (+)
Type: TC
Location: 1375 - 3078 (+)
Gene ID: HRGMv2_4399_73_3
Type: CAZyme
Location: 3505 - 5580 (+)
Type: CAZyme
Location: 3505 - 5580 (+)
Gene ID: HRGMv2_4399_73_4
Type: TC
Location: 6277 - 7764 (-)
Type: TC
Location: 6277 - 7764 (-)
Gene ID: HRGMv2_4399_73_5
Type: pfam
Location: 7781 - 8362 (-)
Type: pfam
Location: 7781 - 8362 (-)
Gene ID: HRGMv2_4399_73_6
Type:
Location: 8436 - 8924 (+)
Type:
Location: 8436 - 8924 (+)
Gene ID: HRGMv2_4399_73_7
Type: TC
Location: 9208 - 9906 (-)
Type: TC
Location: 9208 - 9906 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp003343565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.