Cluster: HRGMv2_4399_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4399
- CGC Family ID: CGCFAM_01630
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4399_192 | HRGMv2_4399_192_1 | 2 | 343 | - | 1.C.109.1.4 |
| NULL(UNKNOWN) | HRGMv2_4399_192 | HRGMv2_4399_192_2 | 343 | 780 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4399_192 | HRGMv2_4399_192_3 | 999 | 2609 | + | CE20 | CE20 |
| CAZyme | HRGMv2_4399_192 | HRGMv2_4399_192_4 | 2623 | 4176 | + | CE20 |
Gene ID: HRGMv2_4399_192_1
Type: TC
Location: 2 - 343 (-)
Type: TC
Location: 2 - 343 (-)
Gene ID: HRGMv2_4399_192_2
Type:
Location: 343 - 780 (-)
Type:
Location: 343 - 780 (-)
Gene ID: HRGMv2_4399_192_3
Type: CAZyme
Location: 999 - 2609 (+)
Type: CAZyme
Location: 999 - 2609 (+)
Gene ID: HRGMv2_4399_192_4
Type: CAZyme
Location: 2623 - 4176 (+)
Type: CAZyme
Location: 2623 - 4176 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp003343565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.