Cluster: HRGMv2_4399_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4399
- CGC Family ID: CGCFAM_01630
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4399_172 | HRGMv2_4399_172_1 | 1 | 1119 | + | CE20 |
| CAZyme | HRGMv2_4399_172 | HRGMv2_4399_172_2 | 1122 | 2636 | + | CE20 |
| NULL(UNKNOWN) | HRGMv2_4399_172 | HRGMv2_4399_172_3 | 3094 | 3939 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4399_172 | HRGMv2_4399_172_4 | 3989 | 5071 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_4399_172_1
Type: CAZyme
Location: 1 - 1119 (+)
Type: CAZyme
Location: 1 - 1119 (+)
Gene ID: HRGMv2_4399_172_2
Type: CAZyme
Location: 1122 - 2636 (+)
Type: CAZyme
Location: 1122 - 2636 (+)
Gene ID: HRGMv2_4399_172_3
Type:
Location: 3094 - 3939 (+)
Type:
Location: 3094 - 3939 (+)
Gene ID: HRGMv2_4399_172_4
Type: TC
Location: 3989 - 5071 (-)
Type: TC
Location: 3989 - 5071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp003343565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.