Cluster: HRGMv2_4399_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4399
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4399_148 | HRGMv2_4399_148_1 | 219 | 1607 | + | GH109 |
| NULL(UNKNOWN) | HRGMv2_4399_148 | HRGMv2_4399_148_2 | 1625 | 2194 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4399_148 | HRGMv2_4399_148_3 | 2281 | 3591 | + | FKBP_C | Trigger_N | Trigger_C |
| TC | HRGMv2_4399_148 | HRGMv2_4399_148_4 | 4251 | 5522 | + | 9.A.40.2.2 |
Gene ID: HRGMv2_4399_148_1
Type: CAZyme
Location: 219 - 1607 (+)
Type: CAZyme
Location: 219 - 1607 (+)
Gene ID: HRGMv2_4399_148_2
Type:
Location: 1625 - 2194 (+)
Type:
Location: 1625 - 2194 (+)
Gene ID: HRGMv2_4399_148_3
Type: pfam
Location: 2281 - 3591 (+)
Type: pfam
Location: 2281 - 3591 (+)
Gene ID: HRGMv2_4399_148_4
Type: TC
Location: 4251 - 5522 (+)
Type: TC
Location: 4251 - 5522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp003343565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.