Cluster: HRGMv2_4399_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4399
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4399_117 | HRGMv2_4399_117_4 | 2429 | 4819 | + | GH13_14 |
| pfam | HRGMv2_4399_117 | HRGMv2_4399_117_5 | 5236 | 6102 | - | Formyl_trans_N | Formyl_trans_C |
| TC | HRGMv2_4399_117 | HRGMv2_4399_117_6 | 6118 | 6699 | - | 4.D.2.1.8 |
Gene ID: HRGMv2_4399_117_4
Type: CAZyme
Location: 2429 - 4819 (+)
Type: CAZyme
Location: 2429 - 4819 (+)
Gene ID: HRGMv2_4399_117_5
Type: pfam
Location: 5236 - 6102 (-)
Type: pfam
Location: 5236 - 6102 (-)
Gene ID: HRGMv2_4399_117_6
Type: TC
Location: 6118 - 6699 (-)
Type: TC
Location: 6118 - 6699 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp003343565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.