Cluster: HRGMv2_4398_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4398_120 | HRGMv2_4398_120_2 | 337 | 1836 | - | 2.A.114.1.6 |
| pfam | HRGMv2_4398_120 | HRGMv2_4398_120_3 | 1905 | 2333 | + | CRCB |
| TC | HRGMv2_4398_120 | HRGMv2_4398_120_4 | 2330 | 2704 | + | 1.A.43.1.7 |
| NULL(UNKNOWN) | HRGMv2_4398_120 | HRGMv2_4398_120_5 | 2792 | 4216 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4398_120 | HRGMv2_4398_120_6 | 4569 | 6737 | - | GH36 |
Gene ID: HRGMv2_4398_120_2
Type: TC
Location: 337 - 1836 (-)
Type: TC
Location: 337 - 1836 (-)
Gene ID: HRGMv2_4398_120_3
Type: pfam
Location: 1905 - 2333 (+)
Type: pfam
Location: 1905 - 2333 (+)
Gene ID: HRGMv2_4398_120_4
Type: TC
Location: 2330 - 2704 (+)
Type: TC
Location: 2330 - 2704 (+)
Gene ID: HRGMv2_4398_120_5
Type:
Location: 2792 - 4216 (-)
Type:
Location: 2792 - 4216 (-)
Gene ID: HRGMv2_4398_120_6
Type: CAZyme
Location: 4569 - 6737 (-)
Type: CAZyme
Location: 4569 - 6737 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.