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Cluster: HRGMv2_4398_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4398_108 HRGMv2_4398_108_9 8097 8549 + 3.A.3.5.2
TC HRGMv2_4398_108 HRGMv2_4398_108_10 8519 9859 + 3.A.3.5.2
TC HRGMv2_4398_108 HRGMv2_4398_108_11 9906 10148 + 3.A.3.5.2
pfam HRGMv2_4398_108 HRGMv2_4398_108_12 10222 10671 - Bac_rhamnosid_C
CAZyme HRGMv2_4398_108 HRGMv2_4398_108_13 10665 11762 - GH78
CAZyme HRGMv2_4398_108 HRGMv2_4398_108_14 11753 12505 - CBM67
Gene ID: HRGMv2_4398_108_9
Type: TC
Location: 8097 - 8549 (+)
Gene ID: HRGMv2_4398_108_10
Type: TC
Location: 8519 - 9859 (+)
Gene ID: HRGMv2_4398_108_11
Type: TC
Location: 9906 - 10148 (+)
Gene ID: HRGMv2_4398_108_12
Type: pfam
Location: 10222 - 10671 (-)
Gene ID: HRGMv2_4398_108_13
Type: CAZyme
Location: 10665 - 11762 (-)
Gene ID: HRGMv2_4398_108_14
Type: CAZyme
Location: 11753 - 12505 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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