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Cluster: HRGMv2_4398_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4398_40 HRGMv2_4398_40_16 15403 17145 + 2.A.49.6.1
pfam HRGMv2_4398_40 HRGMv2_4398_40_17 17579 18646 - Radical_SAM
CAZyme HRGMv2_4398_40 HRGMv2_4398_40_18 18625 20295 - GT8
NULL(UNKNOWN) HRGMv2_4398_40 HRGMv2_4398_40_19 20292 20441 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4398_40 HRGMv2_4398_40_20 20441 21466 - GT8
TC HRGMv2_4398_40 HRGMv2_4398_40_21 21833 23581 + 3.A.1.106.2
CAZyme HRGMv2_4398_40 HRGMv2_4398_40_22 23965 24612 - GT8
pfam HRGMv2_4398_40 HRGMv2_4398_40_23 25138 25881 + Cache_3-Cache_2 | sCache_3_3
TC HRGMv2_4398_40 HRGMv2_4398_40_24 25923 27359 + 1.B.52.2.1
Gene ID: HRGMv2_4398_40_16
Type: TC
Location: 15403 - 17145 (+)
Gene ID: HRGMv2_4398_40_17
Type: pfam
Location: 17579 - 18646 (-)
Gene ID: HRGMv2_4398_40_18
Type: CAZyme
Location: 18625 - 20295 (-)
Gene ID: HRGMv2_4398_40_19
Type:
Location: 20292 - 20441 (-)
Gene ID: HRGMv2_4398_40_20
Type: CAZyme
Location: 20441 - 21466 (-)
Gene ID: HRGMv2_4398_40_21
Type: TC
Location: 21833 - 23581 (+)
Gene ID: HRGMv2_4398_40_22
Type: CAZyme
Location: 23965 - 24612 (-)
Gene ID: HRGMv2_4398_40_23
Type: pfam
Location: 25138 - 25881 (+)
Gene ID: HRGMv2_4398_40_24
Type: TC
Location: 25923 - 27359 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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