Cluster: HRGMv2_4398_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4398_36 | HRGMv2_4398_36_43 | 41216 | 43345 | - | GH78 |
| peptidase | HRGMv2_4398_36 | HRGMv2_4398_36_44 | 43788 | 45704 | + | C44.UPW |
| pfam | HRGMv2_4398_36 | HRGMv2_4398_36_45 | 45805 | 46239 | + | Glyco_hydro_77 |
| CAZyme | HRGMv2_4398_36 | HRGMv2_4398_36_46 | 46230 | 47066 | + | GH77 |
| pfam | HRGMv2_4398_36 | HRGMv2_4398_36_47 | 47048 | 47341 | + | Glyco_hydro_77 |
| TC | HRGMv2_4398_36 | HRGMv2_4398_36_48 | 47357 | 49123 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_4398_36_43
Type: CAZyme
Location: 41216 - 43345 (-)
Type: CAZyme
Location: 41216 - 43345 (-)
Gene ID: HRGMv2_4398_36_44
Type: peptidase
Location: 43788 - 45704 (+)
Type: peptidase
Location: 43788 - 45704 (+)
Gene ID: HRGMv2_4398_36_45
Type: pfam
Location: 45805 - 46239 (+)
Type: pfam
Location: 45805 - 46239 (+)
Gene ID: HRGMv2_4398_36_46
Type: CAZyme
Location: 46230 - 47066 (+)
Type: CAZyme
Location: 46230 - 47066 (+)
Gene ID: HRGMv2_4398_36_47
Type: pfam
Location: 47048 - 47341 (+)
Type: pfam
Location: 47048 - 47341 (+)
Gene ID: HRGMv2_4398_36_48
Type: TC
Location: 47357 - 49123 (+)
Type: TC
Location: 47357 - 49123 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.