Cluster: HRGMv2_4398_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4398_277 | HRGMv2_4398_277_12 | 11192 | 11794 | + | 1.A.62.2.2 |
| NULL(UNKNOWN) | HRGMv2_4398_277 | HRGMv2_4398_277_13 | 11923 | 12303 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4398_277 | HRGMv2_4398_277_14 | 12393 | 12803 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4398_277 | HRGMv2_4398_277_15 | 12800 | 13618 | - | GH39 |
Gene ID: HRGMv2_4398_277_12
Type: TC
Location: 11192 - 11794 (+)
Type: TC
Location: 11192 - 11794 (+)
Gene ID: HRGMv2_4398_277_13
Type:
Location: 11923 - 12303 (+)
Type:
Location: 11923 - 12303 (+)
Gene ID: HRGMv2_4398_277_14
Type:
Location: 12393 - 12803 (-)
Type:
Location: 12393 - 12803 (-)
Gene ID: HRGMv2_4398_277_15
Type: CAZyme
Location: 12800 - 13618 (-)
Type: CAZyme
Location: 12800 - 13618 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.