Cluster: HRGMv2_4398_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4398_19 | HRGMv2_4398_19_2 | 511 | 3687 | - | GH148 |
| TC | HRGMv2_4398_19 | HRGMv2_4398_19_3 | 3920 | 5398 | - | 2.A.38.1.3 |
| TC | HRGMv2_4398_19 | HRGMv2_4398_19_4 | 5402 | 6757 | - | 2.A.38.1.1 |
| pfam | HRGMv2_4398_19 | HRGMv2_4398_19_5 | 7042 | 7623 | + | Hydrolase | HAD_2 |
| NULL(UNKNOWN) | HRGMv2_4398_19 | HRGMv2_4398_19_6 | 7671 | 7847 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4398_19 | HRGMv2_4398_19_7 | 8174 | 10000 | + | 1.A.33.1.2 |
Gene ID: HRGMv2_4398_19_2
Type: CAZyme
Location: 511 - 3687 (-)
Type: CAZyme
Location: 511 - 3687 (-)
Gene ID: HRGMv2_4398_19_3
Type: TC
Location: 3920 - 5398 (-)
Type: TC
Location: 3920 - 5398 (-)
Gene ID: HRGMv2_4398_19_4
Type: TC
Location: 5402 - 6757 (-)
Type: TC
Location: 5402 - 6757 (-)
Gene ID: HRGMv2_4398_19_5
Type: pfam
Location: 7042 - 7623 (+)
Type: pfam
Location: 7042 - 7623 (+)
Gene ID: HRGMv2_4398_19_6
Type:
Location: 7671 - 7847 (-)
Type:
Location: 7671 - 7847 (-)
Gene ID: HRGMv2_4398_19_7
Type: TC
Location: 8174 - 10000 (+)
Type: TC
Location: 8174 - 10000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.