Cluster: HRGMv2_4398_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4398_220 | HRGMv2_4398_220_1 | 295 | 2409 | - | GH106 |
| TC | HRGMv2_4398_220 | HRGMv2_4398_220_2 | 2554 | 3342 | + | 1.B.6.3.2 |
| STP | HRGMv2_4398_220 | HRGMv2_4398_220_3 | 3444 | 4319 | + | PIG-L |
| pfam | HRGMv2_4398_220 | HRGMv2_4398_220_4 | 4408 | 5211 | - | PPK2 |
| TC | HRGMv2_4398_220 | HRGMv2_4398_220_5 | 5218 | 7716 | - | 4.C.1.1.4 |
Gene ID: HRGMv2_4398_220_1
Type: CAZyme
Location: 295 - 2409 (-)
Type: CAZyme
Location: 295 - 2409 (-)
Gene ID: HRGMv2_4398_220_2
Type: TC
Location: 2554 - 3342 (+)
Type: TC
Location: 2554 - 3342 (+)
Gene ID: HRGMv2_4398_220_3
Type: STP
Location: 3444 - 4319 (+)
Type: STP
Location: 3444 - 4319 (+)
Gene ID: HRGMv2_4398_220_4
Type: pfam
Location: 4408 - 5211 (-)
Type: pfam
Location: 4408 - 5211 (-)
Gene ID: HRGMv2_4398_220_5
Type: TC
Location: 5218 - 7716 (-)
Type: TC
Location: 5218 - 7716 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.