Cluster: HRGMv2_4398_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4398_204 | HRGMv2_4398_204_19 | 15815 | 17410 | + | GH106 |
| pfam | HRGMv2_4398_204 | HRGMv2_4398_204_20 | 17421 | 18329 | + | Glyco_hydro_2_N | Glyco_hydro_106 | Glyco_hydro_2_N2 |
| TC | HRGMv2_4398_204 | HRGMv2_4398_204_21 | 18388 | 19278 | + | 2.A.4.7.9 |
Gene ID: HRGMv2_4398_204_19
Type: CAZyme
Location: 15815 - 17410 (+)
Type: CAZyme
Location: 15815 - 17410 (+)
Gene ID: HRGMv2_4398_204_20
Type: pfam
Location: 17421 - 18329 (+)
Type: pfam
Location: 17421 - 18329 (+)
Gene ID: HRGMv2_4398_204_21
Type: TC
Location: 18388 - 19278 (+)
Type: TC
Location: 18388 - 19278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.