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Cluster: HRGMv2_4398_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4398_171 HRGMv2_4398_171_3 918 1637 - 2.A.1.3.38
CAZyme HRGMv2_4398_171 HRGMv2_4398_171_4 1752 3512 - GH163
NULL(UNKNOWN) HRGMv2_4398_171 HRGMv2_4398_171_5 3500 3979 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4398_171 HRGMv2_4398_171_6 4203 4550 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4398_171 HRGMv2_4398_171_7 4653 4904 + 3.D.1.6.3
pfam HRGMv2_4398_171 HRGMv2_4398_171_8 5081 6295 + ketoacyl-synt | Ketoacyl-synt_C
pfam HRGMv2_4398_171 HRGMv2_4398_171_9 6437 7471 + 3keto-disac_hyd
TC HRGMv2_4398_171 HRGMv2_4398_171_10 7789 8889 + 2.A.40.7.6
Gene ID: HRGMv2_4398_171_3
Type: TC
Location: 918 - 1637 (-)
Gene ID: HRGMv2_4398_171_4
Type: CAZyme
Location: 1752 - 3512 (-)
Gene ID: HRGMv2_4398_171_5
Type:
Location: 3500 - 3979 (-)
Gene ID: HRGMv2_4398_171_6
Type:
Location: 4203 - 4550 (+)
Gene ID: HRGMv2_4398_171_7
Type: TC
Location: 4653 - 4904 (+)
Gene ID: HRGMv2_4398_171_8
Type: pfam
Location: 5081 - 6295 (+)
Gene ID: HRGMv2_4398_171_9
Type: pfam
Location: 6437 - 7471 (+)
Gene ID: HRGMv2_4398_171_10
Type: TC
Location: 7789 - 8889 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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