Cluster: HRGMv2_4398_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4398_161 | HRGMv2_4398_161_1 | 103 | 1257 | - | 2.A.6.2.47 |
| TC | HRGMv2_4398_161 | HRGMv2_4398_161_2 | 1254 | 2390 | - | 2.A.6.2.44 |
| CAZyme | HRGMv2_4398_161 | HRGMv2_4398_161_3 | 2546 | 4954 | + | CBM67 | GH78 |
| pfam | HRGMv2_4398_161 | HRGMv2_4398_161_4 | 5256 | 5906 | + | 3Beta_HSD | Epimerase | NmrA | NAD_binding_10 |
| CAZyme | HRGMv2_4398_161 | HRGMv2_4398_161_5 | 5963 | 7054 | + | CE1 |
Gene ID: HRGMv2_4398_161_1
Type: TC
Location: 103 - 1257 (-)
Type: TC
Location: 103 - 1257 (-)
Gene ID: HRGMv2_4398_161_2
Type: TC
Location: 1254 - 2390 (-)
Type: TC
Location: 1254 - 2390 (-)
Gene ID: HRGMv2_4398_161_3
Type: CAZyme
Location: 2546 - 4954 (+)
Type: CAZyme
Location: 2546 - 4954 (+)
Gene ID: HRGMv2_4398_161_4
Type: pfam
Location: 5256 - 5906 (+)
Type: pfam
Location: 5256 - 5906 (+)
Gene ID: HRGMv2_4398_161_5
Type: CAZyme
Location: 5963 - 7054 (+)
Type: CAZyme
Location: 5963 - 7054 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.