Cluster: HRGMv2_4398_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4398
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4398_132 | HRGMv2_4398_132_8 | 5350 | 6693 | - | GH175 |
| pfam | HRGMv2_4398_132 | HRGMv2_4398_132_9 | 6891 | 7412 | - | Glyco_transf_8 |
| CAZyme | HRGMv2_4398_132 | HRGMv2_4398_132_10 | 7393 | 7839 | - | GT8 |
| TC | HRGMv2_4398_132 | HRGMv2_4398_132_11 | 8159 | 8479 | - | 8.A.8.1.5 |
| TC | HRGMv2_4398_132 | HRGMv2_4398_132_12 | 8578 | 9846 | - | 1.B.9.1.1 |
Gene ID: HRGMv2_4398_132_8
Type: CAZyme
Location: 5350 - 6693 (-)
Type: CAZyme
Location: 5350 - 6693 (-)
Gene ID: HRGMv2_4398_132_9
Type: pfam
Location: 6891 - 7412 (-)
Type: pfam
Location: 6891 - 7412 (-)
Gene ID: HRGMv2_4398_132_10
Type: CAZyme
Location: 7393 - 7839 (-)
Type: CAZyme
Location: 7393 - 7839 (-)
Gene ID: HRGMv2_4398_132_11
Type: TC
Location: 8159 - 8479 (-)
Type: TC
Location: 8159 - 8479 (-)
Gene ID: HRGMv2_4398_132_12
Type: TC
Location: 8578 - 9846 (-)
Type: TC
Location: 8578 - 9846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp944391135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.