Cluster: HRGMv2_4386_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4386
- CGC Family ID: CGCFAM_01751
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4386_83 | HRGMv2_4386_83_5 | 3482 | 4648 | - | GH23 |
| pfam | HRGMv2_4386_83 | HRGMv2_4386_83_6 | 4925 | 5764 | - | TatD_DNase |
| TC | HRGMv2_4386_83 | HRGMv2_4386_83_7 | 5828 | 7279 | - | 2.A.1.17.3 |
Gene ID: HRGMv2_4386_83_5
Type: CAZyme
Location: 3482 - 4648 (-)
Type: CAZyme
Location: 3482 - 4648 (-)
Gene ID: HRGMv2_4386_83_6
Type: pfam
Location: 4925 - 5764 (-)
Type: pfam
Location: 4925 - 5764 (-)
Gene ID: HRGMv2_4386_83_7
Type: TC
Location: 5828 - 7279 (-)
Type: TC
Location: 5828 - 7279 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.