Cluster: HRGMv2_4385_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4385
- CGC Family ID: CGCFAM_10602
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4385_7 | HRGMv2_4385_7_49 | 44600 | 46561 | - | 3.A.16.1.2 |
| CAZyme | HRGMv2_4385_7 | HRGMv2_4385_7_50 | 46887 | 48137 | + | GT2 |
| pfam | HRGMv2_4385_7 | HRGMv2_4385_7_51 | 48258 | 48728 | + | SpoU_methylase |
| TC | HRGMv2_4385_7 | HRGMv2_4385_7_52 | 49433 | 52117 | - | 3.A.3.4.1 |
Gene ID: HRGMv2_4385_7_49
Type: TC
Location: 44600 - 46561 (-)
Type: TC
Location: 44600 - 46561 (-)
Gene ID: HRGMv2_4385_7_50
Type: CAZyme
Location: 46887 - 48137 (+)
Type: CAZyme
Location: 46887 - 48137 (+)
Gene ID: HRGMv2_4385_7_51
Type: pfam
Location: 48258 - 48728 (+)
Type: pfam
Location: 48258 - 48728 (+)
Gene ID: HRGMv2_4385_7_52
Type: TC
Location: 49433 - 52117 (-)
Type: TC
Location: 49433 - 52117 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.