Cluster: HRGMv2_4385_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4385
- CGC Family ID: CGCFAM_01536
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4385_4 | HRGMv2_4385_4_34 | 35975 | 36709 | - | GT51 |
| pfam | HRGMv2_4385_4 | HRGMv2_4385_4_35 | 36762 | 38819 | - | FtsX |
| TC | HRGMv2_4385_4 | HRGMv2_4385_4_36 | 38809 | 39582 | - | 3.A.1.134.12 |
| TC | HRGMv2_4385_4 | HRGMv2_4385_4_37 | 39719 | 41623 | - | 3.A.1.135.5 |
| TC | HRGMv2_4385_4 | HRGMv2_4385_4_38 | 41616 | 43367 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4385_4_34
Type: CAZyme
Location: 35975 - 36709 (-)
Type: CAZyme
Location: 35975 - 36709 (-)
Gene ID: HRGMv2_4385_4_35
Type: pfam
Location: 36762 - 38819 (-)
Type: pfam
Location: 36762 - 38819 (-)
Gene ID: HRGMv2_4385_4_36
Type: TC
Location: 38809 - 39582 (-)
Type: TC
Location: 38809 - 39582 (-)
Gene ID: HRGMv2_4385_4_37
Type: TC
Location: 39719 - 41623 (-)
Type: TC
Location: 39719 - 41623 (-)
Gene ID: HRGMv2_4385_4_38
Type: TC
Location: 41616 - 43367 (-)
Type: TC
Location: 41616 - 43367 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.