Cluster: HRGMv2_4385_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4385
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4385_3 | HRGMv2_4385_3_82 | 92202 | 93935 | + | 3.A.1.135.5 |
| TC | HRGMv2_4385_3 | HRGMv2_4385_3_83 | 93941 | 95677 | + | 3.A.1.135.7 |
| pfam | HRGMv2_4385_3 | HRGMv2_4385_3_84 | 95694 | 97145 | - | NAPRTase | NAPRTase_N | NAPRTase_C |
| NULL(UNKNOWN) | HRGMv2_4385_3 | HRGMv2_4385_3_85 | 97373 | 98266 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4385_3 | HRGMv2_4385_3_86 | 98827 | 99288 | - | 9.A.11.1.1 |
| CAZyme | HRGMv2_4385_3 | HRGMv2_4385_3_87 | 99488 | 100408 | + | CE4 |
Gene ID: HRGMv2_4385_3_82
Type: TC
Location: 92202 - 93935 (+)
Type: TC
Location: 92202 - 93935 (+)
Gene ID: HRGMv2_4385_3_83
Type: TC
Location: 93941 - 95677 (+)
Type: TC
Location: 93941 - 95677 (+)
Gene ID: HRGMv2_4385_3_84
Type: pfam
Location: 95694 - 97145 (-)
Type: pfam
Location: 95694 - 97145 (-)
Gene ID: HRGMv2_4385_3_85
Type:
Location: 97373 - 98266 (-)
Type:
Location: 97373 - 98266 (-)
Gene ID: HRGMv2_4385_3_86
Type: TC
Location: 98827 - 99288 (-)
Type: TC
Location: 98827 - 99288 (-)
Gene ID: HRGMv2_4385_3_87
Type: CAZyme
Location: 99488 - 100408 (+)
Type: CAZyme
Location: 99488 - 100408 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.