Cluster: HRGMv2_4385_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4385
- CGC Family ID: CGCFAM_00057
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4385_2 | HRGMv2_4385_2_115 | 126466 | 128802 | + | GT51 |
| pfam | HRGMv2_4385_2 | HRGMv2_4385_2_116 | 128875 | 130011 | - | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | HRGMv2_4385_2 | HRGMv2_4385_2_117 | 130139 | 131989 | - | 1.A.33.1.4 |
Gene ID: HRGMv2_4385_2_115
Type: CAZyme
Location: 126466 - 128802 (+)
Type: CAZyme
Location: 126466 - 128802 (+)
Gene ID: HRGMv2_4385_2_116
Type: pfam
Location: 128875 - 130011 (-)
Type: pfam
Location: 128875 - 130011 (-)
Gene ID: HRGMv2_4385_2_117
Type: TC
Location: 130139 - 131989 (-)
Type: TC
Location: 130139 - 131989 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.