Cluster: HRGMv2_4385_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4385
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4385_1 | HRGMv2_4385_1_74 | 60323 | 60841 | + | 9.B.156.3.1 |
| STP | HRGMv2_4385_1 | HRGMv2_4385_1_75 | 60846 | 61742 | - | Peptidase_M23 |
| CAZyme | HRGMv2_4385_1 | HRGMv2_4385_1_76 | 61822 | 62568 | - | GT26 |
| CAZyme | HRGMv2_4385_1 | HRGMv2_4385_1_77 | 62600 | 63394 | - | CE4 |
| TC | HRGMv2_4385_1 | HRGMv2_4385_1_78 | 63489 | 64892 | - | 3.A.6.1.1 |
Gene ID: HRGMv2_4385_1_74
Type: TC
Location: 60323 - 60841 (+)
Type: TC
Location: 60323 - 60841 (+)
Gene ID: HRGMv2_4385_1_75
Type: STP
Location: 60846 - 61742 (-)
Type: STP
Location: 60846 - 61742 (-)
Gene ID: HRGMv2_4385_1_76
Type: CAZyme
Location: 61822 - 62568 (-)
Type: CAZyme
Location: 61822 - 62568 (-)
Gene ID: HRGMv2_4385_1_77
Type: CAZyme
Location: 62600 - 63394 (-)
Type: CAZyme
Location: 62600 - 63394 (-)
Gene ID: HRGMv2_4385_1_78
Type: TC
Location: 63489 - 64892 (-)
Type: TC
Location: 63489 - 64892 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.