Cluster: HRGMv2_4384_CGC6
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_4384
- CGC Family ID: CGCFAM_00133
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4384_3 | HRGMv2_4384_3_9 | 23814 | 25502 | + | PL33_2 |
| CAZyme | HRGMv2_4384_3 | HRGMv2_4384_3_10 | 25533 | 27776 | + | CE3 |
| NULL(UNKNOWN) | HRGMv2_4384_3 | HRGMv2_4384_3_11 | 27736 | 27933 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4384_3 | HRGMv2_4384_3_12 | 28078 | 30321 | + | CE3 |
| NULL(UNKNOWN) | HRGMv2_4384_3 | HRGMv2_4384_3_13 | 30409 | 31584 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4384_3 | HRGMv2_4384_3_14 | 32047 | 33828 | + | 8.A.59.2.1 |
| TF | HRGMv2_4384_3 | HRGMv2_4384_3_15 | 33825 | 35408 | + | HTH_AraC | HTH_AraC |
| STP | HRGMv2_4384_3 | HRGMv2_4384_3_16 | 35576 | 36763 | + | SBP_bac_1 |
| CAZyme | HRGMv2_4384_3 | HRGMv2_4384_3_17 | 36787 | 39237 | + | GH94 |
| TC | HRGMv2_4384_3 | HRGMv2_4384_3_18 | 39234 | 40196 | + | 3.A.1.1.29 |
| TC | HRGMv2_4384_3 | HRGMv2_4384_3_19 | 40216 | 41109 | + | 3.A.1.1.29 |
| STP | HRGMv2_4384_3 | HRGMv2_4384_3_20 | 41146 | 42651 | + | SBP_bac_1 |
| NULL(UNKNOWN) | HRGMv2_4384_3 | HRGMv2_4384_3_21 | 42767 | 44290 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4384_3 | HRGMv2_4384_3_22 | 44307 | 46889 | + | GH5 |
Gene ID: HRGMv2_4384_3_9
Type: CAZyme
Location: 23814 - 25502 (+)
Type: CAZyme
Location: 23814 - 25502 (+)
Gene ID: HRGMv2_4384_3_10
Type: CAZyme
Location: 25533 - 27776 (+)
Type: CAZyme
Location: 25533 - 27776 (+)
Gene ID: HRGMv2_4384_3_11
Type:
Location: 27736 - 27933 (+)
Type:
Location: 27736 - 27933 (+)
Gene ID: HRGMv2_4384_3_12
Type: CAZyme
Location: 28078 - 30321 (+)
Type: CAZyme
Location: 28078 - 30321 (+)
Gene ID: HRGMv2_4384_3_13
Type:
Location: 30409 - 31584 (+)
Type:
Location: 30409 - 31584 (+)
Gene ID: HRGMv2_4384_3_14
Type: TC
Location: 32047 - 33828 (+)
Type: TC
Location: 32047 - 33828 (+)
Gene ID: HRGMv2_4384_3_15
Type: TF
Location: 33825 - 35408 (+)
Type: TF
Location: 33825 - 35408 (+)
Gene ID: HRGMv2_4384_3_16
Type: STP
Location: 35576 - 36763 (+)
Type: STP
Location: 35576 - 36763 (+)
Gene ID: HRGMv2_4384_3_17
Type: CAZyme
Location: 36787 - 39237 (+)
Type: CAZyme
Location: 36787 - 39237 (+)
Gene ID: HRGMv2_4384_3_18
Type: TC
Location: 39234 - 40196 (+)
Type: TC
Location: 39234 - 40196 (+)
Gene ID: HRGMv2_4384_3_19
Type: TC
Location: 40216 - 41109 (+)
Type: TC
Location: 40216 - 41109 (+)
Gene ID: HRGMv2_4384_3_20
Type: STP
Location: 41146 - 42651 (+)
Type: STP
Location: 41146 - 42651 (+)
Gene ID: HRGMv2_4384_3_21
Type:
Location: 42767 - 44290 (+)
Type:
Location: 42767 - 44290 (+)
Gene ID: HRGMv2_4384_3_22
Type: CAZyme
Location: 44307 - 46889 (+)
Type: CAZyme
Location: 44307 - 46889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.