Cluster: HRGMv2_4384_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4384
- CGC Family ID: CGCFAM_00200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4384_1 | HRGMv2_4384_1_123 | 144017 | 144769 | - | 3.A.1.7.5 |
| TC | HRGMv2_4384_1 | HRGMv2_4384_1_124 | 144771 | 145637 | - | 3.A.1.7.2 |
| TC | HRGMv2_4384_1 | HRGMv2_4384_1_125 | 145630 | 146511 | - | 3.A.1.7.5 |
| pfam | HRGMv2_4384_1 | HRGMv2_4384_1_126 | 146523 | 147362 | - | PBP_like | PBP_like_2 | SBP_bac_11 |
| CAZyme | HRGMv2_4384_1 | HRGMv2_4384_1_127 | 148152 | 150329 | - | GH94 |
Gene ID: HRGMv2_4384_1_123
Type: TC
Location: 144017 - 144769 (-)
Type: TC
Location: 144017 - 144769 (-)
Gene ID: HRGMv2_4384_1_124
Type: TC
Location: 144771 - 145637 (-)
Type: TC
Location: 144771 - 145637 (-)
Gene ID: HRGMv2_4384_1_125
Type: TC
Location: 145630 - 146511 (-)
Type: TC
Location: 145630 - 146511 (-)
Gene ID: HRGMv2_4384_1_126
Type: pfam
Location: 146523 - 147362 (-)
Type: pfam
Location: 146523 - 147362 (-)
Gene ID: HRGMv2_4384_1_127
Type: CAZyme
Location: 148152 - 150329 (-)
Type: CAZyme
Location: 148152 - 150329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.