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Cluster: HRGMv2_4384_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4384_60 HRGMv2_4384_60_6 10629 13037 - GH39
CAZyme HRGMv2_4384_60 HRGMv2_4384_60_7 13080 14231 - GH130_13
pfam HRGMv2_4384_60 HRGMv2_4384_60_8 14307 15338 - Pectate_lyase22
STP HRGMv2_4384_60 HRGMv2_4384_60_9 15351 16889 - SBP_bac_1
TC HRGMv2_4384_60 HRGMv2_4384_60_10 16905 17798 - 3.A.1.1.10
TC HRGMv2_4384_60 HRGMv2_4384_60_11 17795 18754 - 3.A.1.1.10
TF HRGMv2_4384_60 HRGMv2_4384_60_12 18808 20337 - HTH_AraC | HTH_AraC
TC HRGMv2_4384_60 HRGMv2_4384_60_13 20547 21437 - 8.A.59.2.1
Gene ID: HRGMv2_4384_60_6
Type: CAZyme
Location: 10629 - 13037 (-)
Gene ID: HRGMv2_4384_60_7
Type: CAZyme
Location: 13080 - 14231 (-)
Gene ID: HRGMv2_4384_60_8
Type: pfam
Location: 14307 - 15338 (-)
Gene ID: HRGMv2_4384_60_9
Type: STP
Location: 15351 - 16889 (-)
Gene ID: HRGMv2_4384_60_10
Type: TC
Location: 16905 - 17798 (-)
Gene ID: HRGMv2_4384_60_11
Type: TC
Location: 17795 - 18754 (-)
Gene ID: HRGMv2_4384_60_12
Type: TF
Location: 18808 - 20337 (-)
Gene ID: HRGMv2_4384_60_13
Type: TC
Location: 20547 - 21437 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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