Cluster: HRGMv2_4384_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4384
- CGC Family ID: CGCFAM_01428
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4384_54 | HRGMv2_4384_54_4 | 5233 | 9348 | + | GH141 |
| CAZyme | HRGMv2_4384_54 | HRGMv2_4384_54_5 | 9476 | 13234 | + | GH141 |
| pfam | HRGMv2_4384_54 | HRGMv2_4384_54_6 | 13259 | 15670 | + | CBM_4_9 |
| CAZyme | HRGMv2_4384_54 | HRGMv2_4384_54_7 | 15753 | 19118 | + | CE17 |
| STP | HRGMv2_4384_54 | HRGMv2_4384_54_8 | 19167 | 20792 | + | SBP_bac_1 |
| TC | HRGMv2_4384_54 | HRGMv2_4384_54_9 | 20845 | 21816 | + | 3.A.1.1.10 |
| TC | HRGMv2_4384_54 | HRGMv2_4384_54_10 | 21831 | 22709 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_4384_54_4
Type: CAZyme
Location: 5233 - 9348 (+)
Type: CAZyme
Location: 5233 - 9348 (+)
Gene ID: HRGMv2_4384_54_5
Type: CAZyme
Location: 9476 - 13234 (+)
Type: CAZyme
Location: 9476 - 13234 (+)
Gene ID: HRGMv2_4384_54_6
Type: pfam
Location: 13259 - 15670 (+)
Type: pfam
Location: 13259 - 15670 (+)
Gene ID: HRGMv2_4384_54_7
Type: CAZyme
Location: 15753 - 19118 (+)
Type: CAZyme
Location: 15753 - 19118 (+)
Gene ID: HRGMv2_4384_54_8
Type: STP
Location: 19167 - 20792 (+)
Type: STP
Location: 19167 - 20792 (+)
Gene ID: HRGMv2_4384_54_9
Type: TC
Location: 20845 - 21816 (+)
Type: TC
Location: 20845 - 21816 (+)
Gene ID: HRGMv2_4384_54_10
Type: TC
Location: 21831 - 22709 (+)
Type: TC
Location: 21831 - 22709 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.