Cluster: HRGMv2_4384_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4384
- CGC Family ID: CGCFAM_00058
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4384_52 | HRGMv2_4384_52_2 | 2460 | 4040 | + | 3.A.1.1.10 |
| TC | HRGMv2_4384_52 | HRGMv2_4384_52_3 | 4238 | 5197 | + | 3.A.1.1.10 |
| TC | HRGMv2_4384_52 | HRGMv2_4384_52_4 | 5214 | 6098 | + | 3.A.1.1.29 |
| TF | HRGMv2_4384_52 | HRGMv2_4384_52_5 | 6178 | 8472 | - | HTH_AraC |
| CAZyme | HRGMv2_4384_52 | HRGMv2_4384_52_6 | 8790 | 12545 | + | CBM32 | PL35 |
Gene ID: HRGMv2_4384_52_2
Type: TC
Location: 2460 - 4040 (+)
Type: TC
Location: 2460 - 4040 (+)
Gene ID: HRGMv2_4384_52_3
Type: TC
Location: 4238 - 5197 (+)
Type: TC
Location: 4238 - 5197 (+)
Gene ID: HRGMv2_4384_52_4
Type: TC
Location: 5214 - 6098 (+)
Type: TC
Location: 5214 - 6098 (+)
Gene ID: HRGMv2_4384_52_5
Type: TF
Location: 6178 - 8472 (-)
Type: TF
Location: 6178 - 8472 (-)
Gene ID: HRGMv2_4384_52_6
Type: CAZyme
Location: 8790 - 12545 (+)
Type: CAZyme
Location: 8790 - 12545 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.