Cluster: HRGMv2_4384_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4384
- CGC Family ID: CGCFAM_00051
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4384_48 | HRGMv2_4384_48_6 | 9647 | 11392 | - | 8.A.59.2.1 |
| pfam | HRGMv2_4384_48 | HRGMv2_4384_48_7 | 12030 | 13811 | + | Trehalase | GDE_C |
| CAZyme | HRGMv2_4384_48 | HRGMv2_4384_48_8 | 13892 | 16738 | + | GH89 |
| CAZyme | HRGMv2_4384_48 | HRGMv2_4384_48_9 | 17014 | 19440 | - | GH31_15 |
| TF | HRGMv2_4384_48 | HRGMv2_4384_48_10 | 19691 | 21259 | - | HTH_AraC |
| TC | HRGMv2_4384_48 | HRGMv2_4384_48_11 | 21256 | 23058 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_4384_48_6
Type: TC
Location: 9647 - 11392 (-)
Type: TC
Location: 9647 - 11392 (-)
Gene ID: HRGMv2_4384_48_7
Type: pfam
Location: 12030 - 13811 (+)
Type: pfam
Location: 12030 - 13811 (+)
Gene ID: HRGMv2_4384_48_8
Type: CAZyme
Location: 13892 - 16738 (+)
Type: CAZyme
Location: 13892 - 16738 (+)
Gene ID: HRGMv2_4384_48_9
Type: CAZyme
Location: 17014 - 19440 (-)
Type: CAZyme
Location: 17014 - 19440 (-)
Gene ID: HRGMv2_4384_48_10
Type: TF
Location: 19691 - 21259 (-)
Type: TF
Location: 19691 - 21259 (-)
Gene ID: HRGMv2_4384_48_11
Type: TC
Location: 21256 - 23058 (-)
Type: TC
Location: 21256 - 23058 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.