Cluster: HRGMv2_4384_CGC21
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_4384
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4384_36 | HRGMv2_4384_36_2 | 1595 | 2581 | - | GH130_2 |
| TF | HRGMv2_4384_36 | HRGMv2_4384_36_3 | 2860 | 3696 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4384_36 | HRGMv2_4384_36_4 | 3998 | 5758 | + | CE17 |
| pfam | HRGMv2_4384_36 | HRGMv2_4384_36_5 | 5774 | 8605 | + | SLH | SLH | SLH |
| pfam | HRGMv2_4384_36 | HRGMv2_4384_36_6 | 8607 | 11381 | + | SLH |
| CAZyme | HRGMv2_4384_36 | HRGMv2_4384_36_7 | 11401 | 15723 | + | CBM66 | GH141 |
| CAZyme | HRGMv2_4384_36 | HRGMv2_4384_36_8 | 15766 | 19218 | + | GH141 |
| NULL(UNKNOWN) | HRGMv2_4384_36 | HRGMv2_4384_36_9 | 19456 | 22236 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4384_36 | HRGMv2_4384_36_10 | 22372 | 24399 | + | GH42 |
| CAZyme | HRGMv2_4384_36 | HRGMv2_4384_36_11 | 24436 | 25611 | + | GH27 |
| pfam | HRGMv2_4384_36 | HRGMv2_4384_36_12 | 25636 | 27132 | + | DUF3502 | SBP_bac_8 |
| TC | HRGMv2_4384_36 | HRGMv2_4384_36_13 | 27247 | 28221 | + | 3.A.1.1.29 |
| TC | HRGMv2_4384_36 | HRGMv2_4384_36_14 | 28237 | 29115 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_4384_36_2
Type: CAZyme
Location: 1595 - 2581 (-)
Type: CAZyme
Location: 1595 - 2581 (-)
Gene ID: HRGMv2_4384_36_3
Type: TF
Location: 2860 - 3696 (-)
Type: TF
Location: 2860 - 3696 (-)
Gene ID: HRGMv2_4384_36_4
Type: CAZyme
Location: 3998 - 5758 (+)
Type: CAZyme
Location: 3998 - 5758 (+)
Gene ID: HRGMv2_4384_36_5
Type: pfam
Location: 5774 - 8605 (+)
Type: pfam
Location: 5774 - 8605 (+)
Gene ID: HRGMv2_4384_36_6
Type: pfam
Location: 8607 - 11381 (+)
Type: pfam
Location: 8607 - 11381 (+)
Gene ID: HRGMv2_4384_36_7
Type: CAZyme
Location: 11401 - 15723 (+)
Type: CAZyme
Location: 11401 - 15723 (+)
Gene ID: HRGMv2_4384_36_8
Type: CAZyme
Location: 15766 - 19218 (+)
Type: CAZyme
Location: 15766 - 19218 (+)
Gene ID: HRGMv2_4384_36_9
Type:
Location: 19456 - 22236 (+)
Type:
Location: 19456 - 22236 (+)
Gene ID: HRGMv2_4384_36_10
Type: CAZyme
Location: 22372 - 24399 (+)
Type: CAZyme
Location: 22372 - 24399 (+)
Gene ID: HRGMv2_4384_36_11
Type: CAZyme
Location: 24436 - 25611 (+)
Type: CAZyme
Location: 24436 - 25611 (+)
Gene ID: HRGMv2_4384_36_12
Type: pfam
Location: 25636 - 27132 (+)
Type: pfam
Location: 25636 - 27132 (+)
Gene ID: HRGMv2_4384_36_13
Type: TC
Location: 27247 - 28221 (+)
Type: TC
Location: 27247 - 28221 (+)
Gene ID: HRGMv2_4384_36_14
Type: TC
Location: 28237 - 29115 (+)
Type: TC
Location: 28237 - 29115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.