Cluster: HRGMv2_4384_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4384
- CGC Family ID: CGCFAM_00141
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4384_35 | HRGMv2_4384_35_1 | 3 | 1679 | - | CBM67 | GH78 |
| TF | HRGMv2_4384_35 | HRGMv2_4384_35_2 | 1750 | 4158 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4384_35 | HRGMv2_4384_35_3 | 4506 | 6110 | + | 3.A.1.1.10 |
| TC | HRGMv2_4384_35 | HRGMv2_4384_35_4 | 6186 | 7106 | + | 3.A.1.1.10 |
| TC | HRGMv2_4384_35 | HRGMv2_4384_35_5 | 7124 | 8005 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_4384_35 | HRGMv2_4384_35_6 | 8086 | 9096 | + | GH130_7 |
| CAZyme | HRGMv2_4384_35 | HRGMv2_4384_35_7 | 9129 | 11105 | + | GH78 |
| CAZyme | HRGMv2_4384_35 | HRGMv2_4384_35_8 | 11123 | 14812 | + | PL8 |
Gene ID: HRGMv2_4384_35_1
Type: CAZyme
Location: 3 - 1679 (-)
Type: CAZyme
Location: 3 - 1679 (-)
Gene ID: HRGMv2_4384_35_2
Type: TF
Location: 1750 - 4158 (-)
Type: TF
Location: 1750 - 4158 (-)
Gene ID: HRGMv2_4384_35_3
Type: TC
Location: 4506 - 6110 (+)
Type: TC
Location: 4506 - 6110 (+)
Gene ID: HRGMv2_4384_35_4
Type: TC
Location: 6186 - 7106 (+)
Type: TC
Location: 6186 - 7106 (+)
Gene ID: HRGMv2_4384_35_5
Type: TC
Location: 7124 - 8005 (+)
Type: TC
Location: 7124 - 8005 (+)
Gene ID: HRGMv2_4384_35_6
Type: CAZyme
Location: 8086 - 9096 (+)
Type: CAZyme
Location: 8086 - 9096 (+)
Gene ID: HRGMv2_4384_35_7
Type: CAZyme
Location: 9129 - 11105 (+)
Type: CAZyme
Location: 9129 - 11105 (+)
Gene ID: HRGMv2_4384_35_8
Type: CAZyme
Location: 11123 - 14812 (+)
Type: CAZyme
Location: 11123 - 14812 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.