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Cluster: HRGMv2_4384_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4384_1 HRGMv2_4384_1_98 101684 105166 + 9.A.25.1.1
pfam HRGMv2_4384_1 HRGMv2_4384_1_99 105183 105923 + CMD | Cupin_2
pfam HRGMv2_4384_1 HRGMv2_4384_1_100 105901 106263 + Aldo_ket_red
TC HRGMv2_4384_1 HRGMv2_4384_1_101 106670 107164 + 3.A.1.26.5
TC HRGMv2_4384_1 HRGMv2_4384_1_102 107456 109834 - 3.A.9.1.2
pfam HRGMv2_4384_1 HRGMv2_4384_1_103 110174 113299 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_4384_1 HRGMv2_4384_1_104 113312 114553 + GH29
TF HRGMv2_4384_1 HRGMv2_4384_1_105 114676 115440 - HTH_AraC
TC HRGMv2_4384_1 HRGMv2_4384_1_106 115929 116903 + 3.A.1.1.10
TC HRGMv2_4384_1 HRGMv2_4384_1_107 116920 117813 + 3.A.1.1.29
Gene ID: HRGMv2_4384_1_98
Type: TC
Location: 101684 - 105166 (+)
Gene ID: HRGMv2_4384_1_99
Type: pfam
Location: 105183 - 105923 (+)
Gene ID: HRGMv2_4384_1_100
Type: pfam
Location: 105901 - 106263 (+)
Gene ID: HRGMv2_4384_1_101
Type: TC
Location: 106670 - 107164 (+)
Gene ID: HRGMv2_4384_1_102
Type: TC
Location: 107456 - 109834 (-)
Gene ID: HRGMv2_4384_1_103
Type: pfam
Location: 110174 - 113299 (+)
Gene ID: HRGMv2_4384_1_104
Type: CAZyme
Location: 113312 - 114553 (+)
Gene ID: HRGMv2_4384_1_105
Type: TF
Location: 114676 - 115440 (-)
Gene ID: HRGMv2_4384_1_106
Type: TC
Location: 115929 - 116903 (+)
Gene ID: HRGMv2_4384_1_107
Type: TC
Location: 116920 - 117813 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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